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Embedded Python Wrapper for venv

What's new in this version

Initial Release

iris-embedded-python-wrapper

iris-embedded-python-wrapper provides a stable import iris facade for
InterSystems IRIS Python projects.

It lets the same application code work across the common IRIS Python runtimes:

  • IRIS embedded Python launched by IRIS, for example iris python iris
    or iris session iris followed by :py
  • regular python3 using an installed IRIS embedded Python runtime
  • remote/native connections through the official intersystems-irispython
    SDK

The wrapper keeps iris.cls(...), iris.connect(...), and iris.dbapi
available from one package while making the active runtime explicit through
iris.runtime.

More details about embedded Python in IRIS are available in the
IRIS documentation.

What this project brings

Without this wrapper, Python code often has to care about where it is running:

  • the embedded iris module is available inside an IRIS Python kernel, but not
    automatically from a normal python3 process
  • the official remote SDK also exposes an iris package, so local embedded,
    embedded-kernel, and remote/native imports can shadow each other
  • iris.cls(...) and DB-API connection behavior differ between embedded and
    remote execution
  • Unix dynamic library setup must happen before Python starts, while Windows
    needs DLL directory registration
  • embedded %SQL.Statement and remote DB-API can disagree on IRIS boundary
    values such as SQL NULL and empty string

This package gives you:

  • a unified iris.runtime state model (auto, embedded, native)
  • iris.connect(path=<iris_install_dir>) to enable an embedded-local runtime
    without IRISINSTALLDIR
  • an iris.dbapi facade that can use embedded SQL or the official native
    DB-API driver
  • iris.dbapi.connect(path=<iris_install_dir>) to configure embedded-local
    mode and return a DB-API connection in one call
  • native object proxy support through iris.cls(...) when a remote IRIS handle
    is bound
  • consistent embedded DB-API normalization for SQL NULL and empty strings
  • automatic Windows os.add_dll_directory(...) handling for IRIS libraries
  • Docker and GitHub test flows that run against the official IRIS community
    image without writing into the mounted source tree

Runtime modes

Runtime How it is used Main entry points
embedded-kernel Python is started by IRIS iris python iris, iris session iris then :py
embedded-local normal python3 loads IRIS embedded libraries IRISINSTALLDIR, loader path, iris.connect(path=...), or iris.dbapi.connect(path=...)
native-remote Python connects to a running IRIS instance iris.connect(...), iris.runtime.configure(...), iris.dbapi.connect(mode="native")
unavailable no embedded runtime or native binding is available configure a runtime before using IRIS APIs

Newer features

  • iris.connect(path=...) can configure the embedded runtime on demand when
    the IRIS install directory is known but IRISINSTALLDIR is not set.
  • iris.dbapi.connect(path=...) uses the same embedded runtime configuration
    path and returns an embedded DB-API connection.
  • Explicit path=... loading validates that pythonint came from that IRIS
    installation and reports Unix loader-path failures with the required
    LD_LIBRARY_PATH or DYLD_LIBRARY_PATH setup.
  • iris.runtime is the single source of truth for runtime state and backend
    bindings.
  • iris.dbapi.connect(mode="auto") chooses embedded or native DB-API based on
    explicit arguments and runtime state.
  • Native driver loading prefers the official intersystems-irispython SDK and
    only falls back to the community compatibility module when the official SDK
    is unavailable.
  • Unit tests isolate filesystem/CPF behavior from real iris merge; real IRIS
    kernel and :py checks live in e2e tests.

Prerequisites

To use embedded-local or embedded-kernel mode, you need an InterSystems IRIS
installation (more details can be found
here).

For remote/native mode, you need a running IRIS instance reachable by the
official native driver.

For embedded access from outside an IRIS kernel, configure
Service Call-In and
environment variables.

Configuration of Service Call-In

In the Management Portal, go to System Administration > Security > Services, select %Service_CallIn, and check the Service Enabled box.

More details can be found in the IRIS documentation

Environment Variables

Use the following environment variables as needed:

  • IRISINSTALLDIR: path to the IRIS installation directory
  • LD_LIBRARY_PATH: Linux loader path for IRIS shared libraries
  • DYLD_LIBRARY_PATH: macOS loader path for IRIS shared libraries, where
    allowed by the Python launcher
  • IRISUSERNAME: username for remote/native test connections
  • IRISPASSWORD: password for remote/native test connections
  • IRISNAMESPACE: namespace for remote/native test connections

IRISINSTALLDIR is enough for many wrapper-level checks, but embedded-local
execution from regular python3 on Unix also needs the loader path configured
before Python starts. iris.connect(path=...) can configure Python import paths
at runtime, but it cannot repair Unix dynamic loader resolution after the
process has already started. If pythonint is found but its dependent shared
libraries are not, the runtime error names the loader-path variable that must
include the IRIS bin directory. When embedded-local loading is explicitly
requested, the wrapper emits a RuntimeWarning on Unix if that loader-path
variable does not already include the IRIS bin directory.

Linux and macOS

For Linux and macOS, set the environment variables as follows:

export IRISINSTALLDIR=/opt/iris
export LD_LIBRARY_PATH=$IRISINSTALLDIR/bin:$LD_LIBRARY_PATH
# for macOS
export DYLD_LIBRARY_PATH=$IRISINSTALLDIR/bin:$DYLD_LIBRARY_PATH
# for remote/native connection tests
export IRISUSERNAME=SuperUser
export IRISPASSWORD=
export IRISNAMESPACE=USER

Warning: when embedded-local and the Native API wheel run in the same Python
process, loader-path ordering matters. pythonint needs shared libraries from
the IRIS bin directory, while the Native API wheel needs its bundled ELS SDK
libraries first. See
Native API wheel and IRIS bin loader-path conflict.

Windows

For Windows, set the IRIS install directory as follows:

set IRISINSTALLDIR=C:\path\to\iris

For Python 3.8 and newer, the wrapper automatically registers the IRIS bin
directory with os.add_dll_directory() when IRISINSTALLDIR is set. Update
PATH only when using older Python versions or external tools that need IRIS
DLLs:

set PATH=%IRISINSTALLDIR%\bin;%PATH%

Set the IRIS username, password, and namespace when using remote/native
connections:

set IRISUSERNAME=SuperUser
set IRISPASSWORD=
set IRISNAMESPACE=USER

PowerShell

For PowerShell, you can set the environment variables as follows:

$env:IRISINSTALLDIR="C:\path\to\iris"
$env:IRISUSERNAME="SuperUser"
$env:IRISPASSWORD=""
$env:IRISNAMESPACE="USER"

Installation

pip install iris-embedded-python-wrapper

Usage

Use this package when you want one Python import path across embedded and
remote IRIS code:

  1. import iris and call IRIS classes with iris.cls(...)
  2. inspect or force the active runtime with iris.runtime
  3. enable embedded-local mode with iris.connect(path=...) or
    iris.dbapi.connect(path=...)
  4. connect to remote IRIS through the official native driver
  5. use iris.dbapi for embedded or native SQL access
  6. bind or unbind a virtual environment to IRIS embedded Python with
    bind_iris and unbind_iris

Basic embedded usage

Inside an IRIS embedded Python kernel, import iris exposes the embedded IRIS
APIs:

import iris
iris.system.Version.GetVersion()

Output:

'IRIS for UNIX (Apple Mac OS X for x86-64) 2024.3 (Build 217U) Thu Nov 14 2024 17:29:23 EST'

If the wrapper is imported where no embedded runtime or native connection is
available, IRIS APIs are not silently usable. Configure embedded mode with
IRISINSTALLDIR or iris.connect(path=...), or configure native mode with a
remote connection.

Unified runtime context

The wrapper now uses a unified runtime API through iris.runtime.

Embedded runtime

The wrapper can run in two embedded contexts:

  • embedded-kernel: Python is launched by IRIS, for example with
    iris python iris or iris session iris followed by :py
  • embedded-local: regular python3 loads the IRIS embedded Python libraries
    from an installed IRIS instance

In embedded-kernel, IRIS has already loaded the runtime. Set PYTHONPATH to
the project or installed package location when you need the wrapper instead of
the built-in iris module:

PYTHONPATH=/path/to/iris-embedded-python-wrapper iris python iris

For an interactive session:

PYTHONPATH=/path/to/iris-embedded-python-wrapper iris session iris
USER>:py
>>> import iris
>>> iris.runtime.get().state
'embedded-kernel'

In embedded-local, configure the IRIS install directory and loader path before
starting Python, or provide the install directory at runtime with
iris.connect(path=...) as described below.

Runtime model

  • iris.runtime.mode: selected policy (auto, embedded, native)
  • iris.runtime.state: detected runtime (embedded-kernel, embedded-local, native-remote, unavailable)
  • iris.runtime.embedded_available: whether embedded backend can be used
  • iris.runtime.iris: currently bound native object API handle (optional)
  • iris.runtime.dbapi: optional explicitly bound DB-API connection

Runtime control API

  • iris.runtime.get()
  • iris.runtime.configure(mode="auto", install_dir=None, iris=None, dbapi=None, native_connection=None)
  • iris.runtime.reset()

mode is optional in runtime.configure(...).

  • If iris, native_connection, or dbapi is provided, runtime infers native mode.
  • If no connection handle is provided, runtime stays in auto/embedded detection flow.

runtime.configure(...) also accepts an IRISConnection and auto-converts it to an IRIS handle via createIRIS(...) for iris.cls(...) routing.

Remote iris.cls(...): before and after

The official native API is explicit and low-level. Without the wrapper, remote
code normally keeps an IRIS handle and calls helper methods for every class
method, object method, property read, and property write:

import iris

conn = iris.connect("localhost", 1972, "USER", "SuperUser", "") db = iris.createIRIS(conn)

req = db.classMethodValue("Ens.StringRequest", "%New") db.set(req, "StringValue", "hello") value = db.get(req, "StringValue") db.invoke(req, "SomeInstanceMethod")

result = db.classMethodValue("MyApp.Service", "SomeClassMethod", value)

Some SDK versions also expose invokeClassMethod(...).

same_result = db.invokeClassMethod("MyApp.Service", "SomeClassMethod", value)

With this wrapper, bind the native connection once and use the same
iris.cls(...) shape you would use in embedded Python. The proxy maps a leading
underscore to %, so _New() calls %New.

import iris

conn = iris.connect("localhost", 1972, "USER", "SuperUser", "") iris.runtime.configure(native_connection=conn)

req = iris.cls("Ens.StringRequest")._New() req.StringValue = "hello" value = req.StringValue req.SomeInstanceMethod()

result = iris.cls("MyApp.Service").SomeClassMethod(value)

This keeps remote/native code close to embedded code and removes most direct
use of classMethodValue(...), invokeClassMethod(...), invoke(...),
get(...), and set(...) from application code.

Examples

Force native object API routing:

import iris

conn = iris.connect("localhost", 1972, "USER", "SuperUser", "") iris.runtime.configure(mode="native", native_connection=conn)

obj = iris.cls("Ens.StringRequest")._New()

Native routing with inferred mode and auto-conversion from IRISConnection:

import iris

conn = iris.connect("localhost", 1972, "USER", "SuperUser", "") iris.runtime.configure(native_connection=conn)

obj = iris.cls("Ens.StringRequest")._New()

Force embedded routing:

import iris

iris.runtime.configure(mode="embedded") obj = iris.cls("Ens.StringRequest")._New()

Enable embedded routing with an explicit IRIS installation directory:

import iris

iris.connect(path="/opt/iris") obj = iris.cls("Ens.StringRequest")._New()

This is useful when IRISINSTALLDIR is not set. On Linux and macOS, the
native library path still needs to be configured before Python starts as shown
in the environment setup section; path=... configures the wrapper, but it
cannot change Unix dynamic loader resolution for already-started processes.
The path must point to an IRIS installation directory with bin and
lib/python subdirectories; invalid paths fail before the wrapper mutates
Python import paths. For explicit path=..., the wrapper also
removes stale pythonint modules for the import attempt and verifies that the
loaded pythonint.__file__ is under that installation’s bin or lib/python
directory.

iris.connect(path=...) returns the runtime context. If the loaded embedded
backend does not expose a callable connect, the wrapper emits a
RuntimeWarning; use iris.dbapi.connect(path=...) when you want a DB-API
connection in one call.

Reset to automatic detection:

import iris

iris.runtime.reset()

DB-API (iris.dbapi)

The wrapper exposes a DB-API facade at iris.dbapi.

Supported subset

  • iris.dbapi.connect(...)
  • Connection: cursor(), close(), commit(), rollback()
  • Cursor: execute(), fetchone(), fetchmany(), fetchall(), iteration, close()
  • PEP 249 metadata: apilevel, threadsafety, paramstyle
  • PEP 249 exceptions: Error, InterfaceError, OperationalError, and related subclasses

Value normalization

For the embedded %SQL.Statement backend, the wrapper normalizes IRIS SQL/ObjectScript string boundary values to Python values so embedded and remote DB-API behave the same way:

  • SQL NULL is returned as Python None
  • SQL empty string is returned as Python ""
  • Python None passed as a parameter remains SQL NULL
  • Python "" passed as a parameter is written as an SQL empty string, not SQL NULL

This normalization is limited to the embedded DB-API path. Native/remote DB-API values are returned by the official driver.

For the native object proxy path (iris.cls(...) with iris.runtime configured for native mode), the wrapper also normalizes declared scalar string properties:

  • %String / %RawString scalar properties that come back as None from the native proxy are returned as Python ""
  • non-string properties are left unchanged
  • collection-valued properties are left unchanged
  • arbitrary method return values are left unchanged

Connect modes

iris.dbapi.connect() accepts mode="auto" | "embedded" | "native".

  • mode="embedded": forces embedded SQL backend via %SQL.Statement
  • mode="native": forces native DB-API backend via the official module iris.dbapi
  • mode="auto":
    • if explicit remote arguments are provided (hostname, port, namespace, etc.), uses native
    • if iris.runtime.dbapi is already bound, reuses that DB-API connection
    • otherwise uses embedded (%SQL.Statement) only when runtime policy is not native
    • if iris.runtime is configured for native mode without a bound DB-API connection, raises an error instead of silently falling back to embedded
    • raises an error if embedded runtime is not available

Native resolution uses the official module path iris.dbapi (not intersystems_iris.dbapi).

mode is optional for DB-API.

  • With explicit remote arguments (hostname, port, namespace, username, password, etc.), DB-API infers native.
  • With path=..., DB-API configures embedded-local runtime and returns an
    embedded DB-API connection. mode must be auto or embedded.
  • With iris.runtime.configure(dbapi=conn), DB-API auto mode reuses the bound native connection.
  • Without remote arguments or a bound runtime DB-API connection, DB-API auto mode uses embedded unless iris.runtime is explicitly in native mode.

iris.connect(path=...) and iris.dbapi.connect(path=...) share the same
embedded runtime configuration behavior, but return different things:

  • iris.connect(path=...) returns the RuntimeContext
  • iris.dbapi.connect(path=...) returns a DB-API connection

iris.dbapi.connect(path=...) accepts embedded DB-API options such as
namespace=... and isolation_level=.... It rejects native mode and native
connection arguments such as hostname, port, username, and password.
The path is validated with the same rules as iris.connect(path=...).

Examples

Embedded mode:

import iris

conn = iris.dbapi.connect() cur = conn.cursor() cur.execute("SELECT Name FROM Sample.Person") rows = cur.fetchall() cur.close() conn.close()

Embedded-local mode with an explicit IRIS installation directory:

import iris

conn = iris.dbapi.connect(path="/opt/iris", namespace="USER") cur = conn.cursor() cur.execute("SELECT 1") print(cur.fetchone())

Native mode:

import iris

conn = iris.dbapi.connect( mode="native", hostname="localhost", port=1972, namespace="USER", username="SuperUser", password="", ) cur = conn.cursor() cur.execute("SELECT 1") print(cur.fetchone())

Auto mode with explicit remote arguments (routes to native):

import iris

conn = iris.dbapi.connect( hostname="localhost", port=1972, namespace="USER", username="SuperUser", password="", )

Auto mode with a runtime-bound native DB-API connection:

import iris

conn = iris.dbapi.connect( mode="native", hostname="localhost", port=1972, namespace="USER", username="SuperUser", password="", ) iris.runtime.configure(dbapi=conn)

same_conn = iris.dbapi.connect(mode="auto") assert same_conn is conn

Runtime independence

iris.dbapi.connect() is independent from iris.runtime by default.

Calling iris.dbapi.connect(...) does not auto-bind a connection into iris.runtime.dbapi.
If you need runtime-managed DB-API binding, bind it explicitly with iris.runtime.configure(dbapi=conn).
Once bound, iris.dbapi.connect(mode="auto") reuses that connection instead of creating a new one.

Bind a virtual environment to embedded Python in IRIS

You can bind a Python virtual environment into the IRIS embedded Python
configuration:

bind_iris

Output:

(.venv) demo ‹master*›$ bind_iris
INFO:iris_utils._find_libpython:Created backup at /opt/intersystems/iris/iris.cpf.fa76423a7b924eb085911690c8266129
INFO:iris_utils._find_libpython:Created merge file at /opt/intersystems/iris/iris.cpf.python_merge
up  IRIS              2024.3.0.217.0    1972   /opt/intersystems/iris

Username: SuperUser Password: *** IRIS Merge of /opt/intersystems/iris/iris.cpf.python_merge into /opt/intersystems/iris/iris.cpf IRIS Merge completed successfully INFO:iris_utils._find_libpython:PythonRuntimeLibrary path set to /usr/local/Cellar/python@3.11/3.11.10/Frameworks/Python.framework/Versions/3.11/Python INFO:iris_utils._find_libpython:PythonPath set to /demo/.venv/lib/python3.11/site-packages INFO:iris_utils._find_libpython:PythonRuntimeLibraryVersion set to 3.11

You may need IRIS administrator credentials to bind the virtual environment to
embedded Python in IRIS.

On Windows, restart IRIS after changing the embedded Python configuration.

Unbind a virtual environment from embedded Python in IRIS

unbind_iris

Output:

(.venv) demo ‹master*›$ unbind_iris
INFO:iris_utils._find_libpython:Created merge file at /opt/intersystems/iris/iris.cpf.python_merge
up  IRIS              2024.3.0.217.0    1972   /opt/intersystems/iris

Username: SuperUser Password: *** IRIS Merge of /opt/intersystems/iris/iris.cpf.python_merge into /opt/intersystems/iris/iris.cpf IRIS Merge completed successfully INFO:iris_utils._find_libpython:PythonRuntimeLibrary path set to /usr/local/Cellar/python@3.11/3.11.10/Frameworks/Python.framework/Versions/3.11/Python INFO:iris_utils._find_libpython:PythonPath set to /Other/.venv/lib/python3.11/site-packages INFO:iris_utils._find_libpython:PythonRuntimeLibraryVersion set to 3.11

Running tests

Local .venv

For pure unit tests, use the project virtual environment and keep CPF merge
tests on temporary files:

python3 -m venv .venv
. .venv/bin/activate
python -m pip install --upgrade pip setuptools wheel
python -m pip install -e . pytest
env -u ISC_CPF_MERGE_FILE python -m pytest tests -q

Embedded-local e2e tests from python3 also need an IRIS installation and the
platform loader path configured before Python starts:

export IRISINSTALLDIR=/opt/iris
export LD_LIBRARY_PATH=$IRISINSTALLDIR/bin:$LD_LIBRARY_PATH
python -m pytest tests/iris/test_dbapi_e2e.py -q

On macOS use DYLD_LIBRARY_PATH where your shell and Python launcher allow it.
On Windows, the wrapper registers the IRIS bin directory with
os.add_dll_directory() when IRISINSTALLDIR is set.

Docker

Run the test suite in Docker with the vanilla official InterSystems IRIS
community image:

./scripts/test-docker.sh

Pass any pytest selector or option after the script name:

./scripts/test-docker.sh tests/iris/test_dbapi_embedded.py -q

scripts/test-docker.sh starts docker-compose-test-preview.yml, waits for
IRIS, unlocks the default test passwords, and then delegates pytest execution to
scripts/run-pytest-in-iris.sh. The in-container runner is the single source of
truth for GitHub Actions and local Docker runs.

The container test flow is source-based:

  • the repository is mounted at /irisdev/app read-only
  • PYTHONPATH=/irisdev/app exposes the working tree
  • the test virtual environment is created under /tmp
  • pytest bytecode/cache writes are disabled
  • ISC_CPF_MERGE_FILE is unset before pytest so tests cannot rewrite the repo
    merge file

By default IRIS_E2E_MODES=embedded,remote, so remote DB-API e2e tests run and
the embedded runtime plus embedded DB-API SQL are required from python3.

To test another IRIS image tag:

IRIS_IMAGE_TAG=latest-preview ./scripts/test-docker.sh

Known Issues

Native API wheel and IRIS bin loader-path conflict

If intersystems-irispython is installed in the same environment, be careful
with LD_LIBRARY_PATH and DYLD_LIBRARY_PATH. The Native API wheel ships its
own ELS SDK libraries, and an IRIS installation also contains libraries with
the same names, such as libelsdkcore.dylib on macOS. If the IRIS bin
directory appears first in the loader path, the Native API extension can bind
to the IRIS installation library instead of the wheel’s bundled,
ABI-compatible library. This can fail while importing iris.irissdk with
errors such as Symbol not found or undefined symbol.

Embedded-local mode still needs the IRIS bin directory in the loader path
because pythonint depends on shared libraries from the IRIS installation.
The conflict is ordering: pythonint needs IRIS libraries visible, but the
Native API wheel must resolve its ELS SDK libraries from the wheel before the
dynamic loader searches the IRIS bin directory.

When embedded-local and the Native API must run in the same Python process,
put the wheel’s bundled native library directory before the IRIS bin
directory, and do it before Python starts:

export IRISINSTALLDIR=/opt/iris
export IRIS_WHEEL_LIBS=$(python - <<'PY'
from importlib import metadata
from pathlib import Path

iris_dir = Path(metadata.distribution("intersystems-irispython").locate_file("iris")) for name in (".dylibs", ".libs"): candidate = iris_dir / name if candidate.is_dir(): print(candidate) break PY ) export DYLD_LIBRARY_PATH=$IRIS_WHEEL_LIBS:$IRISINSTALLDIR/bin:$DYLD_LIBRARY_PATH

Linux: use LD_LIBRARY_PATH with the same ordering.

Changing these variables from inside Python cannot repair the current
process. If a process only uses the Native API wheel and does not load
embedded Python, do not point the loader path at an incompatible IRIS bin
directory.

Troubleshooting

You may encounter the following error, here is how to fix them.

No module named ‘pythonint’

This usually means the wrapper cannot find the IRIS embedded Python extension.
Check that IRISINSTALLDIR or path=... points to the IRIS installation
directory, not a parent directory, and that it contains both bin and
lib/python.

If the error mentions IRIS shared libraries, configure the platform loader path
before Python starts:

export IRISINSTALLDIR=/opt/iris
export LD_LIBRARY_PATH=$IRISINSTALLDIR/bin:$LD_LIBRARY_PATH
# macOS
export DYLD_LIBRARY_PATH=$IRISINSTALLDIR/bin:$DYLD_LIBRARY_PATH

IRIS_ACCESSDENIED (-15)

This can occur when Service Call-In is not enabled. Make sure
%Service_CallIn is enabled.

IRIS_ATTACH (-21)

This can occur when the user is not the same as the iris owner. Make sure that the user is the same as the iris owner.

irisbuiltins.SQLError: ddtab+82^%qaqpsq

This error can occur when IRIS dependent libraries are not visible to the
dynamic loader. Prefer setting LD_LIBRARY_PATH on Linux or DYLD_LIBRARY_PATH
on macOS before Python starts, instead of copying IRIS libraries into the
Python installation:

export IRISINSTALLDIR=/opt/iris
export LD_LIBRARY_PATH=$IRISINSTALLDIR/bin:$LD_LIBRARY_PATH
# macOS
export DYLD_LIBRARY_PATH=$IRISINSTALLDIR/bin:$DYLD_LIBRARY_PATH
Made with
Version
1.0.011 May, 2026
Ideas portal
Category
Frameworks
Works with
InterSystems IRIS
First published
11 May, 2026
Last edited
11 May, 2026