OMOP and Atlas on IRIS for Health

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This application is not supported by InterSystems Corporation. Please be notified that you use it at your own responsibility.
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What's new in this version

Initial Release

omop_atlas_webapi

Getting started

  1. Download a project using command: git clone https://github.com/intersystems-community/omop_atlas_webapi.git
  2. Merge parts of compressed IRIS.DAT archives and CSV files: cd omop_atlas_webapi/iris/ cat data.tar.gz.parta* > data.tar.gz cat db/irisapp.tar.gz.parta* > db/irisapp.tar.gz
  3. In the following files, replace the IP address 192.168.1.8 with the IP adress of the PC where you launch this container. DO NOT use localhost or 127.0.0.1!
  4. [ ] /webapi/src/main/resources/db/migration/postgresql/V9.9.9__artificial_dataset.sql
  5. [ ] /webapi/pom.xml
  6. [ ] /atlas/docker/config-local.js
  7. [ ] /atlas/js/config/app.js

  8. Build the container and launch it:

    docker-compose build docker-compose up

    Building may take long time and it depends on the performance of host computer. Wait for a couple of minutes after the launch for the initialisation of container.

  9. Atlas will be available here http://<your.ip.address>:8081/atlas/. Once again, DO NOT use localhost or 127.0.0.1!

Rating
4.5 (1)
Category
Solutions
Works with
InterSystems IRIS for Health
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Author
Raj Singh
Version
1.0.0
Last updated
2023-04-27
Repository
Open
Documentation
Open
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